Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Gm9727-201ENSMUST00000161387 555 ntBASIC14.73□□□□□ -0.05
LdlrP35951 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.73□□□□□ -0.05
LdlrP35951 Gm24513-201ENSMUST00000174964 138 ntBASIC14.73□□□□□ -0.05
LdlrP35951 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.73□□□□□ -0.05
LdlrP35951 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LdlrP35951 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LdlrP35951 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.72□□□□□ -0.05
LdlrP35951 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Gm4995-201ENSMUST00000117247 432 ntBASIC14.72□□□□□ -0.05
LdlrP35951 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.72□□□□□ -0.05
LdlrP35951 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Gm27397-201ENSMUST00000184997 107 ntBASIC14.72□□□□□ -0.05
LdlrP35951 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LdlrP35951 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LdlrP35951 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LdlrP35951 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LdlrP35951 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LdlrP35951 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.71□□□□□ -0.05
LdlrP35951 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.71□□□□□ -0.05
LdlrP35951 Gm6550-201ENSMUST00000187574 993 ntBASIC14.71□□□□□ -0.05
LdlrP35951 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LdlrP35951 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.71□□□□□ -0.05
LdlrP35951 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.71□□□□□ -0.05
LdlrP35951 Gm6089-201ENSMUST00000197666 938 ntBASIC14.71□□□□□ -0.05
LdlrP35951 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.71□□□□□ -0.05
LdlrP35951 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.71□□□□□ -0.05
LdlrP35951 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.71□□□□□ -0.05
LdlrP35951 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LdlrP35951 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.71□□□□□ -0.06
LdlrP35951 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LdlrP35951 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.71□□□□□ -0.06
LdlrP35951 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LdlrP35951 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LdlrP35951 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LdlrP35951 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms