Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.16■□□□□ 0.18
Sox5P35710 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.16■□□□□ 0.18
Sox5P35710 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox5P35710 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox5P35710 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Sox5P35710 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Sox5P35710 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.15■□□□□ 0.18
Sox5P35710 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Sox5P35710 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.15■□□□□ 0.18
Sox5P35710 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sox5P35710 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox5P35710 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox5P35710 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Sox5P35710 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sox5P35710 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
Sox5P35710 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox5P35710 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.14■□□□□ 0.17
Sox5P35710 Ank2-226ENSMUST00000189368 339 ntBASIC16.14■□□□□ 0.17
Sox5P35710 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.14■□□□□ 0.17
Sox5P35710 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox5P35710 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox5P35710 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox5P35710 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Sox5P35710 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox5P35710 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms