Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Apoc1P34928 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.91□□□□□ -0.34
Apoc1P34928 Gm11780-201ENSMUST00000136880 516 ntBASIC12.91□□□□□ -0.34
Apoc1P34928 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Gm18489-201ENSMUST00000172565 551 ntBASIC12.91□□□□□ -0.34
Apoc1P34928 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.91□□□□□ -0.34
Apoc1P34928 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Apoc1P34928 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.91□□□□□ -0.34
Apoc1P34928 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.91□□□□□ -0.34
Apoc1P34928 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Apoc1P34928 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.91□□□□□ -0.34
Apoc1P34928 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Apoc1P34928 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Apoc1P34928 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Apoc1P34928 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Apoc1P34928 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.9□□□□□ -0.34
Apoc1P34928 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Apoc1P34928 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Apoc1P34928 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
Apoc1P34928 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Apoc1P34928 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.9□□□□□ -0.34
Apoc1P34928 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Apoc1P34928 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Apoc1P34928 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Apoc1P34928 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Apoc1P34928 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Apoc1P34928 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Apoc1P34928 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Apoc1P34928 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Apoc1P34928 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Apoc1P34928 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.89□□□□□ -0.35
Apoc1P34928 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.89□□□□□ -0.35
Apoc1P34928 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.89□□□□□ -0.35
Apoc1P34928 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.89□□□□□ -0.35
Apoc1P34928 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.89□□□□□ -0.35
Apoc1P34928 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.89□□□□□ -0.35
Apoc1P34928 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Apoc1P34928 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Apoc1P34928 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Apoc1P34928 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.88□□□□□ -0.35
Apoc1P34928 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Apoc1P34928 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.88□□□□□ -0.35
Apoc1P34928 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.88□□□□□ -0.35
Apoc1P34928 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Apoc1P34928 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms