Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.35□□□□□ -0.43
Col8a2P25318 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.35□□□□□ -0.43
Col8a2P25318 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col8a2P25318 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.35□□□□□ -0.43
Col8a2P25318 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Col8a2P25318 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Col8a2P25318 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Gm13015-201ENSMUST00000118674 204 ntBASIC12.34□□□□□ -0.43
Col8a2P25318 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.34□□□□□ -0.43
Col8a2P25318 Mir6956-201ENSMUST00000183598 62 ntBASIC12.34□□□□□ -0.43
Col8a2P25318 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.34□□□□□ -0.43
Col8a2P25318 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.34□□□□□ -0.43
Col8a2P25318 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Col8a2P25318 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col8a2P25318 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col8a2P25318 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col8a2P25318 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.33□□□□□ -0.43
Col8a2P25318 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col8a2P25318 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Col8a2P25318 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.33□□□□□ -0.44
Col8a2P25318 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.33□□□□□ -0.44
Col8a2P25318 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.33□□□□□ -0.44
Col8a2P25318 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.33□□□□□ -0.44
Col8a2P25318 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col8a2P25318 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col8a2P25318 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms