Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl1P12850 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cxcl1P12850 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl1P12850 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.25□□□□□ -0.45
Cxcl1P12850 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm11780-201ENSMUST00000136880 516 ntBASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.25□□□□□ -0.45
Cxcl1P12850 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.25□□□□□ -0.45
Cxcl1P12850 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.25□□□□□ -0.45
Cxcl1P12850 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl1P12850 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl1P12850 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.24□□□□□ -0.45
Cxcl1P12850 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.24□□□□□ -0.45
Cxcl1P12850 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.24□□□□□ -0.45
Cxcl1P12850 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcl1P12850 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms