Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LtaP09225 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LtaP09225 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LtaP09225 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LtaP09225 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LtaP09225 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LtaP09225 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LtaP09225 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LtaP09225 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.08□□□□□ -0.48
LtaP09225 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.08□□□□□ -0.48
LtaP09225 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.08□□□□□ -0.48
LtaP09225 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.08□□□□□ -0.48
LtaP09225 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.08□□□□□ -0.48
LtaP09225 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.08□□□□□ -0.48
LtaP09225 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LtaP09225 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LtaP09225 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LtaP09225 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LtaP09225 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
LtaP09225 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.07□□□□□ -0.48
LtaP09225 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.07□□□□□ -0.48
LtaP09225 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.07□□□□□ -0.48
LtaP09225 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.07□□□□□ -0.48
LtaP09225 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.07□□□□□ -0.48
LtaP09225 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.07□□□□□ -0.48
LtaP09225 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.07□□□□□ -0.48
LtaP09225 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.07□□□□□ -0.48
LtaP09225 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.07□□□□□ -0.48
LtaP09225 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LtaP09225 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
LtaP09225 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LtaP09225 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.06□□□□□ -0.48
LtaP09225 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Gm23935-201ENSMUST00000102303 57 ntBASIC12.06□□□□□ -0.48
LtaP09225 Gm24270-201ENSMUST00000102326 57 ntBASIC12.06□□□□□ -0.48
LtaP09225 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Rprl2-201ENSMUST00000157150 290 ntBASIC12.06□□□□□ -0.48
LtaP09225 Gm24245-201ENSMUST00000157318 57 ntBASIC12.06□□□□□ -0.48
LtaP09225 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.06□□□□□ -0.48
LtaP09225 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.06□□□□□ -0.48
LtaP09225 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LtaP09225 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.06□□□□□ -0.48
LtaP09225 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms