Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 Mir7023-201ENSMUST00000185093 64 ntBASIC15.68■□□□□ 0.1
TnfP06804 Gm18766-201ENSMUST00000189811 808 ntBASIC15.68■□□□□ 0.1
TnfP06804 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.68■□□□□ 0.1
TnfP06804 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TnfP06804 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.68■□□□□ 0.1
TnfP06804 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TnfP06804 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TnfP06804 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TnfP06804 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.68■□□□□ 0.1
TnfP06804 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.67■□□□□ 0.1
TnfP06804 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TnfP06804 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.67■□□□□ 0.1
TnfP06804 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TnfP06804 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TnfP06804 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TnfP06804 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.66■□□□□ 0.1
TnfP06804 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Gm9726-201ENSMUST00000180321 678 ntBASIC15.66■□□□□ 0.1
TnfP06804 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Gm17837-201ENSMUST00000186435 985 ntBASIC15.66■□□□□ 0.1
TnfP06804 Gm38294-201ENSMUST00000192831 381 ntBASIC15.66■□□□□ 0.1
TnfP06804 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TnfP06804 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TnfP06804 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TnfP06804 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TnfP06804 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
TnfP06804 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.65■□□□□ 0.1
TnfP06804 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.65■□□□□ 0.1
TnfP06804 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.65■□□□□ 0.1
TnfP06804 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TnfP06804 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TnfP06804 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TnfP06804 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TnfP06804 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
TnfP06804 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TnfP06804 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TnfP06804 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms