Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hcn1O88704 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.2□□□□□ -0.14
Hcn1O88704 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.19□□□□□ -0.14
Hcn1O88704 Gm4899-201ENSMUST00000178708 719 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Hcn1O88704 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.19□□□□□ -0.14
Hcn1O88704 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcn1O88704 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.19□□□□□ -0.14
Hcn1O88704 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hcn1O88704 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcn1O88704 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.18□□□□□ -0.14
Hcn1O88704 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.18□□□□□ -0.14
Hcn1O88704 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcn1O88704 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.18□□□□□ -0.14
Hcn1O88704 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcn1O88704 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.17□□□□□ -0.14
Hcn1O88704 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.17□□□□□ -0.14
Hcn1O88704 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.17□□□□□ -0.14
Hcn1O88704 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hcn1O88704 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.17□□□□□ -0.14
Hcn1O88704 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.17□□□□□ -0.14
Hcn1O88704 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hcn1O88704 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcn1O88704 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms