Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh1F7BJK1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh1F7BJK1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms