Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Gm25948-201ENSMUST00000175334 112 ntBASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Gm29541-201ENSMUST00000191351 678 ntBASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Gm10253-201ENSMUST00000194270 940 ntBASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Gm13616-201ENSMUST00000120600 222 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Gm37230-201ENSMUST00000194491 818 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Gm7774-201ENSMUST00000200064 533 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Gm5779-201ENSMUST00000218467 910 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb9E9Q5G2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb9E9Q5G2 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Gm9824-201ENSMUST00000178707 561 ntBASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Gm18049-201ENSMUST00000208909 581 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms