Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.86□□□□□ -0.03
Gm28043E0CXC2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gm27646-201ENSMUST00000183989 110 ntBASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gm28659-201ENSMUST00000188013 759 ntBASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm28043E0CXC2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm28043E0CXC2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Gm13884-201ENSMUST00000118103 829 ntBASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Gm5864-201ENSMUST00000202263 970 ntBASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms