Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Gm13312-201ENSMUST00000119631 718 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Gm8344-201ENSMUST00000119813 856 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Gm8318-201ENSMUST00000182954 872 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm12887B1AVM1 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms