Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.48□□□□□ -0.09
Chd3B1AR17 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chd3B1AR17 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Gm6415-201ENSMUST00000118488 348 ntBASIC14.48□□□□□ -0.09
Chd3B1AR17 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Gm10253-201ENSMUST00000194270 940 ntBASIC14.48□□□□□ -0.09
Chd3B1AR17 Gm7730-201ENSMUST00000212486 454 ntBASIC14.48□□□□□ -0.09
Chd3B1AR17 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.48□□□□□ -0.09
Chd3B1AR17 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chd3B1AR17 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd3B1AR17 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Chd3B1AR17 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Gm8410-201ENSMUST00000117225 605 ntBASIC14.47□□□□□ -0.09
Chd3B1AR17 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd3B1AR17 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd3B1AR17 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm22175-201ENSMUST00000175007 78 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm38225-201ENSMUST00000194001 393 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm37230-201ENSMUST00000194491 818 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm14057-201ENSMUST00000120631 482 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Dupd1-202ENSMUST00000224735 548 ntBASIC14.46□□□□□ -0.09
Chd3B1AR17 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chd3B1AR17 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd3B1AR17 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.46□□□□□ -0.1
Chd3B1AR17 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.46□□□□□ -0.1
Chd3B1AR17 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Chd3B1AR17 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chd3B1AR17 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms