Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.88□□□□□ -0.51
Chd6A3KFM7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.88□□□□□ -0.51
Chd6A3KFM7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm8285-201ENSMUST00000208293 759 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm27331-201ENSMUST00000183705 60 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.87□□□□□ -0.51
Chd6A3KFM7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd6A3KFM7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.86□□□□□ -0.51
Chd6A3KFM7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.86□□□□□ -0.51
Chd6A3KFM7 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd6A3KFM7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gm42900-201ENSMUST00000197184 2167 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms