Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc112A0AUP1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm6550-201ENSMUST00000187574 993 ntBASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm45167-201ENSMUST00000208007 322 ntBASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc112A0AUP1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc112A0AUP1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc112A0AUP1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc112A0AUP1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Gm21362-201ENSMUST00000194272 928 ntBASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc112A0AUP1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gm9103-201ENSMUST00000119371 405 ntBASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms