Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.42□□□□□ -0.26
Smim17A0A504 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.42□□□□□ -0.26
Smim17A0A504 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.42□□□□□ -0.26
Smim17A0A504 Gm29257-201ENSMUST00000186115 639 ntBASIC13.42□□□□□ -0.26
Smim17A0A504 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.42□□□□□ -0.26
Smim17A0A504 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.42□□□□□ -0.26
Smim17A0A504 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smim17A0A504 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smim17A0A504 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.42□□□□□ -0.26
Smim17A0A504 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smim17A0A504 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smim17A0A504 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.41□□□□□ -0.26
Smim17A0A504 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.41□□□□□ -0.26
Smim17A0A504 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.41□□□□□ -0.26
Smim17A0A504 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.41□□□□□ -0.26
Smim17A0A504 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.41□□□□□ -0.26
Smim17A0A504 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smim17A0A504 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smim17A0A504 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smim17A0A504 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.41□□□□□ -0.26
Smim17A0A504 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim17A0A504 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smim17A0A504 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim17A0A504 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim17A0A504 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.4□□□□□ -0.26
Smim17A0A504 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.4□□□□□ -0.26
Smim17A0A504 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim17A0A504 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smim17A0A504 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim17A0A504 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smim17A0A504 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Smim17A0A504 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim17A0A504 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim17A0A504 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim17A0A504 Gm715-201ENSMUST00000117865 831 ntBASIC13.39□□□□□ -0.27
Smim17A0A504 Gm10052-201ENSMUST00000168019 960 ntBASIC13.39□□□□□ -0.27
Smim17A0A504 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms