Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-1A0A0G2JEV5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm14859-201ENSMUST00000117752 357 ntBASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm11780-201ENSMUST00000136880 516 ntBASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-1A0A0G2JEV5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-1A0A0G2JEV5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms