Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm28033-201ENSMUST00000184224 96 ntBASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav6n-6A0A075B6B2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm12644-201ENSMUST00000119935 606 ntBASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm10819-201ENSMUST00000099988 561 ntBASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms