Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 MIR3180-5-201ENST00000583743 153 ntBASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX49Q9Y6V7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 AL645929.1-201ENST00000420084 975 ntBASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 NPAP1P7-201ENST00000613027 823 ntBASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 RCC2P3-201ENST00000418112 1537 ntBASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX49Q9Y6V7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
DDX49Q9Y6V7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.33■■□□□ 1
DDX49Q9Y6V7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX49Q9Y6V7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.33■■□□□ 1
DDX49Q9Y6V7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
DDX49Q9Y6V7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX49Q9Y6V7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.33■■□□□ 1
DDX49Q9Y6V7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX49Q9Y6V7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.33■■□□□ 1
DDX49Q9Y6V7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 AC022211.2-201ENST00000585075 2527 ntBASIC21.32■■□□□ 1
DDX49Q9Y6V7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms