Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61a2Q9JLR1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gm6443-201ENSMUST00000203599 874 ntBASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gm45167-201ENSMUST00000208007 322 ntBASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gm5364-201ENSMUST00000216789 889 ntBASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a2Q9JLR1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a2Q9JLR1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a2Q9JLR1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a2Q9JLR1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.33□□□□□ -0.27
Sec61a2Q9JLR1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.33□□□□□ -0.27
Sec61a2Q9JLR1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms