Protein–RNA interactions for Protein: Q9DBU0

Tm9sf1, Transmembrane 9 superfamily member 1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf1Q9DBU0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tm9sf1Q9DBU0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tm9sf1Q9DBU0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tm9sf1Q9DBU0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tm9sf1Q9DBU0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tm9sf1Q9DBU0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms