Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Gm18733-201ENSMUST00000173950 856 ntBASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl55Q9CZ83 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 AC163637.1-201ENSMUST00000215491 1894 ntBASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Sorbs3-204ENSMUST00000227929 2460 ntBASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Mrpl55Q9CZ83 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Mrpl55Q9CZ83 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms