Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Rprl3-201ENSMUST00000157400 290 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Gm25745-201ENSMUST00000174945 133 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Gm43767-201ENSMUST00000198933 381 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Gm17808-201ENSMUST00000200859 894 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Gm4459-201ENSMUST00000118750 468 ntBASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd1lQ9CXF7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm10499-201ENSMUST00000174094 934 ntBASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1lQ9CXF7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chd1lQ9CXF7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms