Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Rnf135Q9CWS1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gm14140-201ENSMUST00000119999 995 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf135Q9CWS1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Gm14494-201ENSMUST00000118786 435 ntBASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf135Q9CWS1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms