Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Gm5312-201ENSMUST00000203728 547 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Gm43930-201ENSMUST00000203868 845 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Otud1Q9CUB6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14□□□□□ -0.17
Otud1Q9CUB6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Gm30437-201ENSMUST00000206086 1201 ntBASIC14□□□□□ -0.17
Otud1Q9CUB6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14□□□□□ -0.17
Otud1Q9CUB6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Otud1Q9CUB6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Gm27920-201ENSMUST00000183953 96 ntBASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Otud1Q9CUB6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms