Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL356309.3-201ENST00000624132 1934 ntBASIC19.13■□□□□ 0.65
SNX27Q96L92 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX27Q96L92 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX27Q96L92 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX27Q96L92 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX27Q96L92 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNX27Q96L92 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX27Q96L92 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 AF186996.4-201ENST00000467186 377 ntBASIC19.12■□□□□ 0.65
SNX27Q96L92 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.12■□□□□ 0.65
SNX27Q96L92 AC092364.2-202ENST00000597012 1073 ntBASIC19.12■□□□□ 0.65
SNX27Q96L92 AC064862.7-201ENST00000604520 867 ntBASIC19.12■□□□□ 0.65
SNX27Q96L92 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 AC019129.2-201ENST00000609837 1235 ntBASIC19.12■□□□□ 0.65
SNX27Q96L92 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX27Q96L92 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNX27Q96L92 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX27Q96L92 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX27Q96L92 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX27Q96L92 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SNX27Q96L92 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 AL049757.1-201ENST00000616842 1596 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 AL353593.2-201ENST00000602529 1483 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 PMS2P7-201ENST00000506558 1336 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 AC245100.3-201ENST00000441281 285 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 RNPS1P1-201ENST00000507437 918 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 AC073648.2-201ENST00000510116 352 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 AC021087.4-201ENST00000563761 564 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 TERC-201ENST00000602385 541 ntBASIC19.11■□□□□ 0.65
SNX27Q96L92 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SNX27Q96L92 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX27Q96L92 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX27Q96L92 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX27Q96L92 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SNX27Q96L92 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX27Q96L92 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.1■□□□□ 0.65
SNX27Q96L92 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX27Q96L92 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.1■□□□□ 0.65
SNX27Q96L92 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 NKAPP1-205ENST00000585790 367 ntBASIC19.1■□□□□ 0.65
SNX27Q96L92 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 AC073592.4-201ENST00000623827 446 ntBASIC19.1■□□□□ 0.65
SNX27Q96L92 AC073592.5-201ENST00000624854 528 ntBASIC19.1■□□□□ 0.65
SNX27Q96L92 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNX27Q96L92 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX27Q96L92 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX27Q96L92 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms