Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha9Q91Y11 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm6973-201ENSMUST00000117080 721 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm15483-201ENSMUST00000120338 456 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm2213-201ENSMUST00000197485 688 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm2451-201ENSMUST00000199447 999 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm10290-201ENSMUST00000200451 999 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha9Q91Y11 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Gm11543-201ENSMUST00000120758 370 ntBASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdha9Q91Y11 Gm27494-201ENSMUST00000184735 189 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms