Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm21871-201ENSMUST00000194621 696 ntBASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Gm44855-201ENSMUST00000205725 362 ntBASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb5Q91XZ5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Syt7-205ENSMUST00000224135 1557 ntBASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb5Q91XZ5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.39■□□□□ 0.38
Pcdhb5Q91XZ5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb5Q91XZ5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Gm6222-201ENSMUST00000120787 396 ntBASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb5Q91XZ5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms