Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Gm25911-201ENSMUST00000157621 56 ntBASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb11Q91UZ8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Rpph1-201ENSMUST00000175096 319 ntBASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb11Q91UZ8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm20553-201ENSMUST00000204205 844 ntBASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb11Q91UZ8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Gm17271-201ENSMUST00000165535 355 ntBASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb11Q91UZ8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms