Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh18Q8VHR0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Gm15165-201ENSMUST00000118140 502 ntBASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh18Q8VHR0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms