Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm15693-201ENSMUST00000120470 637 ntBASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm13223-201ENSMUST00000118609 747 ntBASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx39aQ8VDW0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Gm29541-201ENSMUST00000191351 678 ntBASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx39aQ8VDW0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms