Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpp40Q8R1F9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpp40Q8R1F9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Gm5479-201ENSMUST00000160578 435 ntBASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpp40Q8R1F9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpp40Q8R1F9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.83■□□□□ 0.13
Rpp40Q8R1F9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpp40Q8R1F9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpp40Q8R1F9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpp40Q8R1F9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpp40Q8R1F9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp40Q8R1F9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms