Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hoxc12Q8K5B8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm18057-201ENSMUST00000208220 503 ntBASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc12Q8K5B8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gm16026-204ENSMUST00000162652 683 ntBASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxc12Q8K5B8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc12Q8K5B8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc12Q8K5B8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Hoxc12Q8K5B8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc12Q8K5B8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxc12Q8K5B8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc12Q8K5B8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc12Q8K5B8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxc12Q8K5B8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc12Q8K5B8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxc12Q8K5B8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms