Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cystm1Q8K353 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.34□□□□□ -0.91
Cystm1Q8K353 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.34□□□□□ -0.91
Cystm1Q8K353 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cystm1Q8K353 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cystm1Q8K353 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cystm1Q8K353 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC9.34□□□□□ -0.92
Cystm1Q8K353 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Cystm1Q8K353 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC9.33□□□□□ -0.92
Cystm1Q8K353 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 AC125350.1-201ENSMUST00000225115 903 ntBASIC9.33□□□□□ -0.92
Cystm1Q8K353 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Carlr-201ENSMUST00000181515 2574 ntBASIC9.33□□□□□ -0.92
Cystm1Q8K353 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cystm1Q8K353 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms