Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shtn1Q8K2Q9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shtn1Q8K2Q9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm11478-201ENSMUST00000117851 599 ntBASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm9522-201ENSMUST00000182394 926 ntBASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm44719-201ENSMUST00000206404 149 ntBASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Shtn1Q8K2Q9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shtn1Q8K2Q9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shtn1Q8K2Q9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shtn1Q8K2Q9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Shtn1Q8K2Q9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gm5479-201ENSMUST00000160578 435 ntBASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gm18018-201ENSMUST00000198273 408 ntBASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shtn1Q8K2Q9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Gm28631-201ENSMUST00000190740 334 ntBASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Gm45668-201ENSMUST00000211271 493 ntBASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Gm16476-201ENSMUST00000221544 139 ntBASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Dupd1-202ENSMUST00000224735 548 ntBASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms