Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Gm12008-201ENSMUST00000117791 755 ntBASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E4f1Q8CCE9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Gm25948-201ENSMUST00000175334 112 ntBASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
E4f1Q8CCE9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gm27321-201ENSMUST00000185021 205 ntBASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
E4f1Q8CCE9 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Gm43125-201ENSMUST00000201724 730 ntBASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
E4f1Q8CCE9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Gm16198-201ENSMUST00000118766 670 ntBASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
E4f1Q8CCE9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms