Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Gm8097-201ENSMUST00000117903 829 ntBASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Gm15372-201ENSMUST00000120729 834 ntBASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd4Q8CC84 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gm27646-201ENSMUST00000183989 110 ntBASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd4Q8CC84 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms