Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx1Q8C8B0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Gm14701-201ENSMUST00000117156 348 ntBASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Alx1Q8C8B0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx1Q8C8B0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Gm29541-201ENSMUST00000191351 678 ntBASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Alx1Q8C8B0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Mir449b-201ENSMUST00000104833 80 ntBASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx1Q8C8B0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.24■□□□□ 0.35
Alx1Q8C8B0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Gm15693-201ENSMUST00000120470 637 ntBASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Gm18049-201ENSMUST00000208909 581 ntBASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Alx1Q8C8B0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms