Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco3Q8BQM7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Gm22697-201ENSMUST00000175194 63 ntBASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco3Q8BQM7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Gm18101-201ENSMUST00000215769 548 ntBASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smco3Q8BQM7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms