Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Gm5364-201ENSMUST00000216789 889 ntBASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Csnk1a1Q8BK63 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Gm13597-201ENSMUST00000121239 375 ntBASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Csnk1a1Q8BK63 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Gm44771-201ENSMUST00000206975 626 ntBASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Gm18206-201ENSMUST00000207027 926 ntBASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Efs-202ENSMUST00000227037 2540 ntBASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Csnk1a1Q8BK63 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Csnk1a1Q8BK63 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms