Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.14□□□□□ -0.47
Sox21Q811W0 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.14□□□□□ -0.47
Sox21Q811W0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.14□□□□□ -0.47
Sox21Q811W0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.14□□□□□ -0.47
Sox21Q811W0 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.14□□□□□ -0.47
Sox21Q811W0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sox21Q811W0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox21Q811W0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox21Q811W0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox21Q811W0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox21Q811W0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Gm18889-201ENSMUST00000174284 929 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Mir6990-201ENSMUST00000183724 91 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Gm10154-201ENSMUST00000084445 354 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.13□□□□□ -0.47
Sox21Q811W0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox21Q811W0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox21Q811W0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.12□□□□□ -0.47
Sox21Q811W0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox21Q811W0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Gm14722-201ENSMUST00000118943 689 ntBASIC12.12□□□□□ -0.47
Sox21Q811W0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.12□□□□□ -0.47
Sox21Q811W0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sox21Q811W0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox21Q811W0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox21Q811W0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms