Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim50Q810I2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trim50Q810I2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim50Q810I2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim50Q810I2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim50Q810I2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.43□□□□□ -0.1
Trim50Q810I2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.43□□□□□ -0.1
Trim50Q810I2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim50Q810I2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.43□□□□□ -0.1
Trim50Q810I2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim50Q810I2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim50Q810I2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.42□□□□□ -0.1
Trim50Q810I2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trim50Q810I2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.42□□□□□ -0.1
Trim50Q810I2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim50Q810I2 Gm17968-201ENSMUST00000194902 784 ntBASIC14.42□□□□□ -0.1
Trim50Q810I2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim50Q810I2 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.42□□□□□ -0.1
Trim50Q810I2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim50Q810I2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim50Q810I2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim50Q810I2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.41□□□□□ -0.1
Trim50Q810I2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm12260-201ENSMUST00000122447 411 ntBASIC14.41□□□□□ -0.1
Trim50Q810I2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Thap2-203ENSMUST00000218989 527 ntBASIC14.41□□□□□ -0.1
Trim50Q810I2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim50Q810I2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim50Q810I2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms