Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Gm18062-201ENSMUST00000208020 547 ntBASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Gm18055-201ENSMUST00000208254 547 ntBASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Gm45453-201ENSMUST00000211758 853 ntBASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gm13464-201ENSMUST00000119418 935 ntBASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gm28760-201ENSMUST00000185995 736 ntBASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gm10766-202ENSMUST00000194123 606 ntBASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gm9797-201ENSMUST00000052902 613 ntBASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snrnp40Q6PE01 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Gm13829-201ENSMUST00000119600 138 ntBASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Gm11918-201ENSMUST00000121660 179 ntBASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Mir7085-201ENSMUST00000184353 66 ntBASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Gm44719-201ENSMUST00000206404 149 ntBASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Snrnp40Q6PE01 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms