Protein–RNA interactions for Protein: Q62203

Sf3a2, Splicing factor 3A subunit 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a2Q62203 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.05□□□□□ -0.48
Sf3a2Q62203 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.05□□□□□ -0.48
Sf3a2Q62203 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sf3a2Q62203 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.04□□□□□ -0.48
Sf3a2Q62203 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a2Q62203 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gm14722-201ENSMUST00000118943 689 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Mir3081-201ENSMUST00000175305 84 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gm19164-201ENSMUST00000210667 640 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.03□□□□□ -0.48
Sf3a2Q62203 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a2Q62203 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a2Q62203 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Olfr129-201ENSMUST00000122318 993 ntBASIC12.02□□□□□ -0.49
Sf3a2Q62203 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3a2Q62203 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms