Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd3Q61060 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Foxd3Q61060 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Celf4-206ENSMUST00000224553 1729 ntBASIC13.61□□□□□ -0.23
Foxd3Q61060 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.61□□□□□ -0.23
Foxd3Q61060 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd3Q61060 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.61□□□□□ -0.23
Foxd3Q61060 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Foxd3Q61060 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd3Q61060 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm25990-201ENSMUST00000102440 86 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm15467-201ENSMUST00000120582 445 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm11780-201ENSMUST00000136880 516 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm10499-201ENSMUST00000174094 934 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Psmb5-202ENSMUST00000227257 622 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.6□□□□□ -0.23
Foxd3Q61060 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd3Q61060 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.6□□□□□ -0.23
Foxd3Q61060 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd3Q61060 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd3Q61060 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd3Q61060 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms