Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ripk1Q60855 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ripk1Q60855 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ripk1Q60855 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ripk1Q60855 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14□□□□□ -0.17
Ripk1Q60855 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ripk1Q60855 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.99□□□□□ -0.17
Ripk1Q60855 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Gm27628-201ENSMUST00000184911 107 ntBASIC13.99□□□□□ -0.17
Ripk1Q60855 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.99□□□□□ -0.17
Ripk1Q60855 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Gm2651-201ENSMUST00000203560 838 ntBASIC13.99□□□□□ -0.17
Ripk1Q60855 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ripk1Q60855 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ripk1Q60855 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.99□□□□□ -0.17
Ripk1Q60855 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.99□□□□□ -0.17
Ripk1Q60855 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ripk1Q60855 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 Mzt1-203ENSMUST00000227948 952 ntBASIC13.98□□□□□ -0.17
Ripk1Q60855 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ripk1Q60855 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ripk1Q60855 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.97□□□□□ -0.17
Ripk1Q60855 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.97□□□□□ -0.17
Ripk1Q60855 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ripk1Q60855 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.97□□□□□ -0.17
Ripk1Q60855 Gm7461-201ENSMUST00000058918 827 ntBASIC13.97□□□□□ -0.17
Ripk1Q60855 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ripk1Q60855 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ripk1Q60855 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms