Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
SNAPC4Q5SXM2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC28.76■■■□□ 2.2
SNAPC4Q5SXM2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC28.76■■■□□ 2.2
SNAPC4Q5SXM2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SNAPC4Q5SXM2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 AC002056.1-201ENST00000395613 760 ntBASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 AC005237.2-201ENST00000434368 219 ntBASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SNAPC4Q5SXM2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 BAD-207ENST00000544785 525 ntTSL 3 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 AC140878.1-201ENST00000565277 250 ntBASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC28.75■■■□□ 2.19
SNAPC4Q5SXM2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 PI4KAP1-204ENST00000612579 1703 ntBASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 AC005332.7-201ENST00000614046 2005 ntBASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 RN7SL589P-201ENST00000481268 310 ntBASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 AL590787.1-201ENST00000568856 1315 ntBASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 AC073130.3-201ENST00000624389 2278 ntBASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
SNAPC4Q5SXM2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 PC-208ENST00000529047 1607 ntTSL 3 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SNAPC4Q5SXM2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AC140658.5-201ENST00000438532 169 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AL135744.1-201ENST00000565098 629 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AC100803.2-201ENST00000562459 1963 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 COX5BP8-201ENST00000416911 349 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AL592309.1-201ENST00000443127 649 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 DUTP2-201ENST00000519164 463 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 SPDYE22P-201ENST00000582158 798 ntBASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
SNAPC4Q5SXM2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC28.71■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms