Protein–RNA interactions for Protein: Q5SFM8

Rbm27, RNA-binding protein 27, mousemouse

Known RBP Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm27Q5SFM8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm27Q5SFM8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm27Q5SFM8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Rbm27Q5SFM8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm25287-201ENSMUST00000103846 110 ntBASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm22918-201ENSMUST00000103855 110 ntBASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm43125-201ENSMUST00000201724 730 ntBASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm27Q5SFM8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Gm14701-201ENSMUST00000117156 348 ntBASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Gm2810-201ENSMUST00000118681 990 ntBASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Gm43474-201ENSMUST00000196415 774 ntBASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm27Q5SFM8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Gm15920-201ENSMUST00000118998 402 ntBASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm27Q5SFM8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rbm27Q5SFM8 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm27Q5SFM8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms