Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm9063-201ENSMUST00000223299 582 ntBASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Gm5745-201ENSMUST00000183748 313 ntBASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-2Q5R1I4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Gm27680-201ENSMUST00000184192 160 ntBASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Gm7730-201ENSMUST00000212486 454 ntBASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-2Q5R1I4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Sybu-209ENSMUST00000228639 4113 ntBASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Gm13464-201ENSMUST00000119418 935 ntBASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-2Q5R1I4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-2Q5R1I4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-2Q5R1I4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms