Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-3Q5R1C3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm29707-201ENSMUST00000196325 491 ntBASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-3Q5R1C3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-3Q5R1C3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms